CompSciWeek5
From Predictive Chemistry
Revision as of 12:07, 22 September 2014 by David M. Rogers (talk | contribs) (→Class 1: Effective Design)
Reading:
- Beginning Python, Chapters 7-8 and 16 (on Testing)
- Bioinformatics Code Design
Class 1: Effective Design
- Code walk-through, parsing and using graphs
- Structured Code, Bioinformatics example from AOS Book
- Code Testing
- Source Code Versioning
- basic git
Class 2: Using HPC Resources
- Accessing binaries and libraries, using modules
- Using scratch space
- Submitting a job script
- Managing queued jobs
- Advanced scripting tips and tricks
- awk
